BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021G02SP1|AL427804
(825 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1486 1602 0.0
>3x_Contig1486
Length = 12131
Score = 1602 bits (803), Expect = 0.0
Identities = 815/825 (98%)
Strand = Plus / Minus
Query: 1 gatccatatcatttcccaacagtttacttcaccaagtmtttttmatatattggttgtgca 60
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 8547 gatccatatcatttcccaacagtttacttcaccaagtctttttcatatattggttgtgca 8488
Query: 61 ttmtttatataaagattttaaacttctgaaatgtgcagtattccgccacacgtgatgacg 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8487 ttctttatataaagattttaaacttctgaaatgtgcagtattccgccacacgtgatgacg 8428
Query: 121 atataataataccaaatacatgagaaaaccagttggaatccctttaaagcatgcagaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8427 atataataataccaaatacatgagaaaaccagttggaatccctttaaagcatgcagaacc 8368
Query: 181 cactctttatagaaaggaacgagcacacaatttacctaacaacttcagcgcacagttcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8367 cactctttatagaaaggaacgagcacacaatttacctaacaacttcagcgcacagttcgc 8308
Query: 241 tcctatcctgcaagtmacgatgggaacgtgctttcttmatgtatggracgcttgctggcc 300
||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 8307 tcctatcctgcaagtaacgatgggaacgtgctttcttcatgtatggaacgcttgctggcc 8248
Query: 301 cttttttcaacctcgaaggaatagggtgctgaaaatagaaggaaccctgtttttaaggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8247 cttttttcaacctcgaaggaatagggtgctgaaaatagaaggaaccctgtttttaaggga 8188
Query: 361 aaactgaatgaaaagaaaaaaagaaggtaactcgaagatgcatcttagtgccgccactat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8187 aaactgaatgaaaagaaaaaaagaaggtaactcgaagatgcatcttagtgccgccactat 8128
Query: 421 aagtracccttttcatggagctcagcacaatacacctgacacaggcaataagctcaatcg 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8127 aagtaacccttttcatggagctcagcacaatacacctgacacaggcaataagctcaatcg 8068
Query: 481 atcaatttattttaagaaaccttgatctggatgcaaagcttctcaataattttgtacctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8067 atcaatttattttaagaaaccttgatctggatgcaaagcttctcaataattttgtacctt 8008
Query: 541 ttccttgtggttactatgatatcattttgcatcatttacgtctctgcctcattgcgattg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8007 ttccttgtggttactatgatatcattttgcatcatttacgtctctgcctcattgcgattg 7948
Query: 601 anaaatatttttttcgatttttgttatttaggaacaaagtgagtngcaactaagaatcct 660
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 7947 aaaaatatttttttcgatttttgttatttaggaacaaagtgagtcgcaactaagaatcct 7888
Query: 661 acatcacactatttcggtcagcttggattgaattagaatggtagatgtattttctaaaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7887 acatcacactatttcggtcagcttggattgaattagaatggtagatgtattttctaaaca 7828
Query: 721 tatcaatcacagtataaccgttataactaatatacagagtaactttattttcatctcgaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7827 tatcaatcacagtataaccgttataactaatatacagagtaactttattttcatctcgaa 7768
Query: 781 taagcttttttccaattcagaagacgactccgagattttgttmct 825
|||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 7767 taagcttttttccaattcagaagacgactccgagattttgttcct 7723
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6734
Number of Sequences: 1807
Number of extensions: 6734
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 825
length of database: 10,358,551
effective HSP length: 16
effective length of query: 809
effective length of database: 10,329,639
effective search space: 8356677951
effective search space used: 8356677951
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)